SMTL ID : 2hcn.1

Crystal structure of RNA dependent RNA polymerase domain from west nile virus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: D.226, D.359 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.226, A:D.359, H2O.4, H2O.4, H2O.4

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: E.130, H.134, C.139, T.141, C.142 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.130, A:H.134, A:C.139, A:C.142 ZN.3: 3 residues within 4Å: Chain A: H.407, C.423, C.542 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.407, A:C.423, A:C.542

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malet, H. et al., Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5. J.Biol.Chem. (2007)

Release Date

2007-02-06

Peptides

RNA-directed RNA polymerase (NS5): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-directed RNA polymerase (NS5)

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