SMTL ID : 2hd0.1 (5 other biounits)

Structure of the catalytic domain of hepatitis C virus NS2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

homo-dimer

Ligands

4 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 3 residues within 4Å: Chain A: A.31, G.32, V.36 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.36 Hydrogen bonds: A:A.31 BOG.2: 3 residues within 4Å: Chain A: L.9, V.15, R.22 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.9 Hydrogen bonds: A:R.22 Salt bridges: A:R.22 BOG.3: 3 residues within 4Å: Chain A: A.39, K.42, L.46 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:K.42, A:L.46 Water bridges: A:K.42, A:K.42 Salt bridges: A:K.42 BOG.4: 5 residues within 4Å: Chain B: L.9, V.15, Q.18, L.20, R.22 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:L.20 Hydrogen bonds: B:Q.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lorenz, I.C. et al., Structure of the catalytic domain of the hepatitis C virus NS2-3 protease. Nature (2006)

Release Date

2006-08-01

Peptides

Protease NS2-3 (p23): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protease NS2-3 (p23)

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