SMTL ID : 2heh.1

Crystal Structure of the KIF2C motor domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: T.149 Ligands: ADP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.149, H2O.1, H2O.1, H2O.1, H2O.1

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 12 residues within 4Å: Chain A: R.58, R.60, P.61, Q.143, T.144, G.145, S.146, G.147, K.148, T.149, H.150 Ligands: MG.1 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:R.58, A:G.145, A:S.146, A:G.147, A:K.148, A:T.149, A:H.150 Water bridges: A:R.58, A:T.144, A:K.148, A:T.149, A:T.149, A:D.286 Salt bridges: A:K.148 pi-Stacking: A:H.150, A:H.150

10 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 3 residues within 4Å: Chain A: R.214, V.215, K.337 No protein-ligand interaction detected (PLIP) UNX.4: 6 residues within 4Å: Chain A: I.198, H.265, S.313, S.336, K.337, L.338 No protein-ligand interaction detected (PLIP) UNX.5: 1 residues within 4Å: Chain A: K.91 No protein-ligand interaction detected (PLIP) UNX.6: 3 residues within 4Å: Chain A: L.98, E.99, N.100 No protein-ligand interaction detected (PLIP) UNX.7: 4 residues within 4Å: Chain A: E.230, I.271, M.278, K.281 No protein-ligand interaction detected (PLIP) UNX.8: 2 residues within 4Å: Chain A: E.217, D.218 No protein-ligand interaction detected (PLIP) UNX.9: 3 residues within 4Å: Chain A: R.52, I.53, K.380 No protein-ligand interaction detected (PLIP) UNX.10: 5 residues within 4Å: Chain A: M.152, G.153, G.166, Y.168, A.169 No protein-ligand interaction detected (PLIP) UNX.11: 2 residues within 4Å: Chain A: D.174, L.178 No protein-ligand interaction detected (PLIP) UNX.12: 5 residues within 4Å: Chain A: Q.221, H.330, T.331, F.333, R.343 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, J. et al., Crystal structure of the kif2c motor domain. to be published

Release Date

2006-07-18

Peptides

KIF2C protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

KIF2C protein

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