SMTL ID : 2hew.1

The X-ray crystal structure of murine OX40L

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-trimer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.45 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.45 NAG.3: 1 residues within 4Å: Chain B: N.45 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.45 NAG.5: 1 residues within 4Å: Chain C: N.45 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:N.45

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: R.18, K.35, N.36 Chain C: R.75, H.78 7 PLIP interactions: 4 interactions with chain A, 3 interactions with chain C Hydrogen bonds: A:N.36, A:N.36 Salt bridges: A:R.18, A:K.35, C:R.75, C:H.78 Water bridges: C:S.99 SO4.4: 5 residues within 4Å: Chain A: R.75, H.78 Chain B: R.18, K.35, N.36 7 PLIP interactions: 3 interactions with chain A, 4 interactions with chain B Water bridges: A:S.99 Salt bridges: A:R.75, A:H.78, B:R.18, B:K.35 Hydrogen bonds: B:N.36, B:N.36 SO4.6: 5 residues within 4Å: Chain B: R.75, H.78 Chain C: R.18, K.35, N.36 7 PLIP interactions: 4 interactions with chain C, 3 interactions with chain B Hydrogen bonds: C:N.36, C:N.36 Salt bridges: C:R.18, C:K.35, B:R.75, B:H.78 Water bridges: B:S.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Compaan, D.M. et al., The Crystal Structure of the Costimulatory OX40-OX40L Complex. Structure (2006)

Release Date

2006-08-29

Peptides

Tumor necrosis factor ligand superfamily member 4: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
F

C
F

Tumor necrosis factor ligand superfamily member 4

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