- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 4 x ZN: ZINC ION(Non-covalent)
ZN.2: 4 residues within 4Å:- Chain A: C.100, C.132
- Chain B: C.100
- Ligands: ZN.6
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain B- Metal complexes: A:C.100, A:C.132, B:C.100
ZN.3: 2 residues within 4Å:- Chain A: H.105, H.109
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:H.105, A:H.109
ZN.6: 4 residues within 4Å:- Chain B: C.100, H.101, C.132
- Ligands: ZN.2
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:C.100, B:H.101, B:C.132, H2O.5
ZN.7: 2 residues within 4Å:- Chain B: H.105, H.109
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:H.105, B:H.109
- 2 x GSP: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE(Non-covalent)
GSP.4: 26 residues within 4Å:- Chain A: A.46, I.47, G.48, S.49, G.50, K.51, T.52, L.53, D.80, R.83, E.125, G.128, N.172, K.173, D.175, L.176, S.204, L.205, K.206
- Chain B: T.150, E.151, G.152, K.158, A.179, V.180
- Ligands: MG.1
22 PLIP interactions:18 interactions with chain A, 4 interactions with chain B- Hydrogen bonds: A:G.48, A:G.50, A:K.51, A:T.52, A:L.53, A:E.125, A:N.172, A:K.173, A:S.204, A:L.205, A:K.206, B:K.158, B:A.179
- Water bridges: A:T.52, A:T.52, A:E.125, B:V.180
- Salt bridges: A:K.51, A:R.83, A:D.175, B:K.158
- pi-Cation interactions: A:K.173
GSP.8: 25 residues within 4Å:- Chain A: E.151, G.152, K.158, A.179, V.180
- Chain B: A.46, I.47, G.48, S.49, G.50, K.51, T.52, L.53, D.80, R.83, E.125, G.128, N.172, K.173, D.175, L.176, S.204, L.205, K.206
- Ligands: MG.5
21 PLIP interactions:18 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:G.48, B:G.50, B:K.51, B:T.52, B:L.53, B:E.125, B:N.172, B:K.173, B:S.204, B:L.205, B:K.206, A:K.158, A:A.179
- Water bridges: B:R.83, B:R.83, B:G.128, A:V.180
- Salt bridges: B:K.51, B:R.83, B:D.175
- pi-Cation interactions: B:K.173
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gasper, R. et al., Structural insights into HypB, a GTP-binding protein that regulates metal binding. J.Biol.Chem. (2006)
- Release Date
- 2006-07-04
- Peptides
- Probable hydrogenase nickel incorporation protein hypB: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x GSP: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gasper, R. et al., Structural insights into HypB, a GTP-binding protein that regulates metal binding. J.Biol.Chem. (2006)
- Release Date
- 2006-07-04
- Peptides
- Probable hydrogenase nickel incorporation protein hypB: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B