SMTL ID : 2hfo.1

Crystal Structures of the Synechocystis Photoreceptor Slr1694 Reveal Distinct Structural States Related to Signaling

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-10-mer

Ligands

10 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 18 residues within 4Å: Chain A: Y.11, I.27, S.30, S.31, R.33, N.34, N.35, L.44, F.51, Q.53, L.55, T.65, R.68, I.69, D.72, R.74, H.75, M.96 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:I.27, A:I.27, A:L.44, A:F.51 Hydrogen bonds: A:S.30, A:N.34, A:N.35, A:N.35, A:Q.53, A:R.68, A:R.68, A:D.72, A:D.72, A:R.74 Water bridges: A:R.74 Salt bridges: A:R.33 FMN.2: 18 residues within 4Å: Chain B: Y.11, I.27, S.30, S.31, R.33, N.34, N.35, L.44, F.51, Q.53, L.55, T.65, R.68, I.69, D.72, R.74, H.75, M.96 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:I.27, B:I.27, B:L.44, B:F.51 Hydrogen bonds: B:S.30, B:N.34, B:N.35, B:N.35, B:Q.53, B:R.68, B:R.68, B:D.72 Salt bridges: B:R.33 FMN.3: 18 residues within 4Å: Chain C: Y.11, I.27, S.30, S.31, R.33, N.34, N.35, L.44, F.51, Q.53, L.55, T.65, R.68, I.69, D.72, R.74, H.75, W.94 16 PLIP interactions: 16 interactions with chain C Hydrophobic interactions: C:I.27, C:I.27, C:L.44, C:F.51, C:D.72 Hydrogen bonds: C:N.34, C:N.34, C:N.35, C:N.35, C:Q.53, C:R.68, C:R.68, C:D.72, C:D.72, C:R.74 Salt bridges: C:R.33 FMN.4: 17 residues within 4Å: Chain D: Y.11, I.27, S.30, S.31, R.33, N.34, N.35, F.51, Q.53, L.55, T.65, R.68, I.69, D.72, R.74, H.75, W.94 15 PLIP interactions: 15 interactions with chain D Hydrophobic interactions: D:I.27, D:I.27, D:F.51, D:D.72 Hydrogen bonds: D:N.34, D:N.35, D:N.35, D:Q.53, D:R.68, D:R.68, D:R.68, D:D.72, D:D.72, D:R.74 Salt bridges: D:R.33 FMN.5: 16 residues within 4Å: Chain E: Y.11, I.27, S.30, S.31, N.34, N.35, L.44, F.51, Q.53, L.55, T.65, R.68, I.69, D.72, R.74, H.75 14 PLIP interactions: 14 interactions with chain E Hydrophobic interactions: E:I.27, E:I.27, E:L.44, E:F.51, E:D.72 Hydrogen bonds: E:S.30, E:N.34, E:N.35, E:N.35, E:Q.53, E:R.68, E:R.68, E:D.72, E:R.74 FMN.6: 17 residues within 4Å: Chain F: Y.11, I.27, S.30, S.31, R.33, N.34, N.35, L.44, F.51, Q.53, L.55, T.65, R.68, I.69, D.72, R.74, H.75 16 PLIP interactions: 16 interactions with chain F Hydrophobic interactions: F:I.27, F:I.27, F:L.44, F:F.51 Hydrogen bonds: F:S.30, F:N.34, F:N.34, F:N.35, F:N.35, F:Q.53, F:R.68, F:R.68, F:D.72, F:D.72, F:R.74 Salt bridges: F:R.33 FMN.7: 18 residues within 4Å: Chain G: Y.11, I.27, S.30, S.31, R.33, N.34, N.35, L.44, F.51, Q.53, L.55, T.65, R.68, I.69, D.72, R.74, H.75, M.96 14 PLIP interactions: 14 interactions with chain G Hydrophobic interactions: G:I.27, G:I.27, G:F.51, G:D.72 Hydrogen bonds: G:S.30, G:R.33, G:N.34, G:N.35, G:N.35, G:Q.53, G:R.68, G:R.68, G:D.72, G:R.74 FMN.8: 18 residues within 4Å: Chain H: Y.11, I.27, S.30, S.31, R.33, N.34, N.35, L.44, F.51, Q.53, L.55, T.65, R.68, I.69, D.72, R.74, H.75, M.96 16 PLIP interactions: 16 interactions with chain H Hydrophobic interactions: H:I.27, H:I.27, H:F.51, H:I.69, H:D.72 Hydrogen bonds: H:S.30, H:N.34, H:N.35, H:N.35, H:Q.53, H:R.68, H:D.72, H:D.72, H:R.74 Water bridges: H:R.68 Salt bridges: H:R.33 FMN.9: 16 residues within 4Å: Chain I: Y.11, I.27, S.30, S.31, R.33, N.34, N.35, L.44, F.51, Q.53, T.65, R.68, I.69, D.72, R.74, H.75 15 PLIP interactions: 15 interactions with chain I Hydrophobic interactions: I:I.27, I:I.27, I:L.44, I:F.51 Hydrogen bonds: I:S.30, I:N.34, I:N.35, I:N.35, I:Q.53, I:R.68, I:R.68, I:D.72, I:D.72, I:R.74 Salt bridges: I:R.33 FMN.10: 17 residues within 4Å: Chain J: Y.11, I.27, S.30, S.31, R.33, N.34, N.35, L.44, F.51, Q.53, T.65, R.68, I.69, D.72, R.74, H.75, M.96 15 PLIP interactions: 15 interactions with chain J Hydrophobic interactions: J:I.27, J:I.27, J:L.44, J:F.51, J:D.72 Hydrogen bonds: J:S.30, J:N.34, J:N.35, J:N.35, J:Q.53, J:R.68, J:R.68, J:D.72, J:R.74 Salt bridges: J:R.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yuan, H. et al., Crystal structures of the Synechocystis photoreceptor Slr1694 reveal distinct structural states related to signaling. Biochemistry (2006)

Release Date

2006-12-19

Peptides

Activator of photopigment and puc expression: ABCDEFGHIJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

Activator of photopigment and puc expression

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