SMTL ID : 2hfp.1

Crystal Structure of PPAR Gamma with N-sulfonyl-2-indole carboxamide ligands

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NSI: 3-(4-METHOXYPHENYL)-N-(PHENYLSULFONYL)-1-[3-(TRIFLUOROMETHYL)BENZYL]-1H-INDOLE-2-CARBOXAMIDE(Non-covalent)

NSI.1: 23 residues within 4Å: Chain A: L.60, E.64, I.67, K.70, H.71, I.86, G.89, C.90, R.93, S.94, A.97, I.131, M.134, L.135, L.138, V.144, L.145, I.146, S.147, M.153, L.158, M.169 Ligands: NSI.2 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.67, A:I.86, A:R.93, A:L.138, A:V.144, A:V.144, A:I.146, A:I.146, A:L.158 Hydrogen bonds: A:K.70, A:S.147 Water bridges: A:E.148, A:E.148 NSI.2: 18 residues within 4Å: Chain A: A.83, F.87, C.90, Q.91, S.94, H.128, Y.132, L.135, F.165, F.168, M.169, K.172, H.254, L.257, L.258, L.274, Y.278 Ligands: NSI.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.135, A:F.168, A:L.257, A:L.258 Hydrogen bonds: A:K.172, A:K.172, A:H.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hopkins, C.R. et al., Design and synthesis of novel N-sulfonyl-2-indole carboxamides as potent PPAR-gamma binding agents with potential application to the treatment of osteoporosis. Bioorg.Med.Chem.Lett. (2006)

Release Date

2006-09-19

Peptides

Peroxisome proliferator-activated receptor gamma: A
SRC Peptide Fragment: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

SRC Peptide Fragment

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