- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 5 residues within 4Å:- Chain A: L.410, R.412, R.418, A.453, H.456
4 PLIP interactions:4 interactions with chain A- Water bridges: A:A.453
- Salt bridges: A:R.412, A:R.418, A:H.456
SO4.4: 11 residues within 4Å:- Chain A: R.125, D.127, E.144, N.146, E.368, G.369, R.450
- Ligands: MG.1, MG.2, ADP.5, GSH.6
12 PLIP interactions:12 interactions with chain A- Hydrogen bonds: A:D.127, A:N.146, A:N.146, A:G.369, A:G.369
- Water bridges: A:R.450, A:R.450, A:R.450, A:R.450, A:R.450
- Salt bridges: A:R.125, A:R.450
SO4.9: 5 residues within 4Å:- Chain B: L.410, R.412, R.418, A.453, H.456
4 PLIP interactions:4 interactions with chain B- Water bridges: B:A.453
- Salt bridges: B:R.412, B:R.418, B:H.456
SO4.10: 11 residues within 4Å:- Chain B: R.125, D.127, E.144, N.146, E.368, G.369, R.450
- Ligands: MG.7, MG.8, ADP.11, GSH.12
12 PLIP interactions:12 interactions with chain B- Hydrogen bonds: B:N.146, B:N.146, B:E.368, B:G.369, B:G.369
- Water bridges: B:R.450, B:R.450, B:R.450, B:R.450, B:R.450
- Salt bridges: B:R.125, B:R.450
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.5: 24 residues within 4Å:- Chain A: M.129, I.143, E.144, K.305, V.362, K.364, R.367, E.368, G.369, G.370, N.373, Y.375, M.398, E.399, K.400, I.401, E.425, K.452, A.457, D.458, G.459
- Ligands: MG.1, MG.2, SO4.4
20 PLIP interactions:20 interactions with chain A- Hydrogen bonds: A:K.364, A:G.369, A:G.370, A:N.373, A:E.399, A:I.401, A:E.425, A:K.452
- Water bridges: A:N.146, A:K.305, A:N.372, A:N.372, A:R.450, A:R.450, A:R.450, A:R.450, A:G.460
- Salt bridges: A:K.305, A:K.305, A:K.364
ADP.11: 24 residues within 4Å:- Chain B: M.129, I.143, E.144, K.305, V.362, K.364, R.367, E.368, G.369, G.370, N.373, Y.375, M.398, E.399, K.400, I.401, E.425, K.452, A.457, D.458, G.459
- Ligands: MG.7, MG.8, SO4.10
23 PLIP interactions:23 interactions with chain B- Hydrogen bonds: B:K.364, B:G.369, B:G.370, B:N.373, B:Y.375, B:E.399, B:I.401, B:E.425, B:K.452
- Water bridges: B:N.146, B:K.305, B:N.372, B:N.372, B:E.425, B:E.425, B:R.450, B:R.450, B:R.450, B:R.450, B:G.460
- Salt bridges: B:K.305, B:K.305, B:K.364
- 2 x GSH: GLUTATHIONE(Non-covalent)
GSH.6: 19 residues within 4Å:- Chain A: R.125, N.146, I.148, S.149, A.150, S.151, F.152, E.214, N.216, Q.220, R.267, Y.270, E.368, G.369, R.450, G.460, V.461, A.462
- Ligands: SO4.4
14 PLIP interactions:14 interactions with chain A- Hydrophobic interactions: A:Y.270
- Hydrogen bonds: A:R.125, A:R.125, A:S.149, A:S.151, A:S.151, A:E.214, A:N.216, A:Q.220, A:Y.270, A:V.461, A:A.462
- Salt bridges: A:R.267, A:R.450
GSH.12: 19 residues within 4Å:- Chain B: R.125, N.146, I.148, S.149, A.150, S.151, F.152, E.214, N.216, Q.220, R.267, Y.270, E.368, G.369, R.450, G.460, V.461, A.462
- Ligands: SO4.10
14 PLIP interactions:14 interactions with chain B- Hydrophobic interactions: B:Y.270
- Hydrogen bonds: B:R.125, B:R.125, B:S.149, B:S.151, B:S.151, B:E.214, B:N.216, B:Q.220, B:V.461, B:A.462
- Water bridges: B:Y.270
- Salt bridges: B:R.267, B:R.450
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Polekhina, G. et al., Molecular basis of glutathione synthetase deficiency and a rare gene permutation event. EMBO J. (1999)
- Release Date
- 1999-06-22
- Peptides
- PROTEIN (GLUTATHIONE SYNTHETASE): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x GSH: GLUTATHIONE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Polekhina, G. et al., Molecular basis of glutathione synthetase deficiency and a rare gene permutation event. EMBO J. (1999)
- Release Date
- 1999-06-22
- Peptides
- PROTEIN (GLUTATHIONE SYNTHETASE): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A