SMTL ID : 2hgz.1

Crystal structure of a p-benzoyl-L-phenylalanyl-tRNA synthetase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x PBF: PARA-(BENZOYL)-PHENYLALANINE(Non-covalent)

PBF.1: 15 residues within 4Å: Chain A: G.31, I.32, G.33, F.34, E.35, L.64, A.66, H.69, I.136, Y.150, Q.154, T.157, S.158, L.161, Q.172 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.64, A:A.66, A:Q.154, A:T.157, A:L.161 Hydrogen bonds: A:G.33, A:E.35, A:E.35, A:Q.154, A:Q.154, A:Q.172 pi-Stacking: A:H.69 PBF.2: 15 residues within 4Å: Chain B: G.31, I.32, G.33, F.34, E.35, L.64, A.66, H.69, I.136, Y.150, Q.154, T.157, S.158, L.161, Q.172 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:L.64, B:A.66, B:Q.154, B:T.157, B:L.161 Hydrogen bonds: B:G.33, B:E.35, B:Y.150, B:Q.154, B:Q.154, B:Q.172 pi-Stacking: B:H.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, W. et al., Structural basis for the recognition of para-benzoyl-L-phenylalanine by evolved aminoacyl-tRNA synthetases. Angew.Chem.Int.Ed.Engl. (2007)

Release Date

2007-06-05

Peptides

Tyrosyl-tRNA synthetase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Tyrosyl-tRNA synthetase