SMTL ID : 2hhp.1

Structure of yeast poly(A) polymerase in a closed conformation.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

2 x FLC: CITRATE ANION(Non-covalent)

FLC.1: 3 residues within 4Å: Chain A: A.20, N.23, K.24 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:A.20 Hydrogen bonds: A:N.23, A:D.27 FLC.2: 6 residues within 4Å: Chain A: Y.224, N.226, G.232, G.233, V.234 Ligands: MG.3 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.233, A:V.234 Water bridges: A:S.89, A:N.226, A:G.232, A:A.235

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: D.102, D.154 Ligands: FLC.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Balbo, P.B. et al., X-ray crystallographic and steady state fluorescence characterization of the protein dynamics of yeast polyadenylate polymerase. J.Mol.Biol. (2007)

Release Date

2007-01-23

Peptides

Poly(A) polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Poly(A) polymerase