SMTL ID : 2hnh.1

Crystal structure of the catalytic alpha subunit of E. coli replicative DNA polymerase III

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 8 residues within 4Å: Chain A: R.10, H.83, G.133, R.135, M.136, I.171, R.175, D.201 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:M.136, A:D.201 Water bridges: A:R.135, A:R.135, A:R.135, A:R.203 Salt bridges: A:R.10, A:H.83, A:R.135, A:R.175 PO4.2: 4 residues within 4Å: Chain A: K.52, D.542, S.544 Ligands: PO4.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.544, A:S.544 Water bridges: A:S.544 Salt bridges: A:K.52 PO4.3: 5 residues within 4Å: Chain A: I.431, T.432, F.433, D.542 Ligands: PO4.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:F.433, A:F.433, A:D.542 Water bridges: A:F.433

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lamers, M.H. et al., Crystal Structure of the Catalytic alpha Subunit of E. coli Replicative DNA Polymerase III. Cell(Cambridge,Mass.) (2006)

Release Date

2006-09-19

Peptides

DNA polymerase III alpha subunit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA polymerase III alpha subunit