SMTL ID : 2ht7.1

N8 neuraminidase in open complex with oseltamivir

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

4 x G39: (3R,4R,5S)-4-(ACETYLAMINO)-5-AMINO-3-(PENTAN-3-YLOXY)CYCLOHEX-1-ENE-1-CARBOXYLIC ACID(Non-covalent)

G39.1: 13 residues within 4Å: Chain A: R.36, E.37, R.70, W.97, I.141, R.143, A.165, E.195, E.196, R.211, Y.264, R.288, Y.322 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.97, A:I.141, A:I.141, A:A.165 Hydrogen bonds: A:E.37, A:R.70, A:Y.322 Salt bridges: A:R.36, A:R.211, A:R.288 G39.2: 13 residues within 4Å: Chain B: R.36, E.37, R.70, W.97, I.141, R.143, A.165, E.195, E.196, R.211, Y.264, R.288, Y.322 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:W.97, B:I.141, B:I.141, B:A.165 Hydrogen bonds: B:E.37, B:R.70, B:Y.322 Salt bridges: B:R.36, B:R.211, B:R.288 G39.3: 13 residues within 4Å: Chain C: R.36, E.37, R.70, W.97, I.141, R.143, A.165, E.195, E.196, R.211, Y.264, R.288, Y.322 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:W.97, C:I.141, C:I.141, C:A.165 Hydrogen bonds: C:E.37, C:R.70, C:Y.322 Salt bridges: C:R.36, C:R.211, C:R.288 G39.4: 13 residues within 4Å: Chain D: R.36, E.37, R.70, W.97, I.141, R.143, A.165, E.195, E.196, R.211, Y.264, R.288, Y.322 10 PLIP interactions: 10 interactions with chain D Hydrophobic interactions: D:W.97, D:I.141, D:I.141, D:A.165 Hydrogen bonds: D:E.37, D:R.70, D:Y.322 Salt bridges: D:R.36, D:R.211, D:R.288

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Russell, R.J. et al., The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design. Nature (2006)

Release Date

2006-09-05

Peptides

Neuraminidase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Neuraminidase

Related Entries With Identical Sequence