SMTL ID : 2hu4.1 (1 other biounit)

N1 neuraminidase in complex with oseltamivir 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x G39: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid(Non-covalent)

G39.1: 14 residues within 4Å: Chain A: R.36, E.37, D.69, R.70, W.97, R.143, S.165, E.195, E.196, R.211, N.213, Y.262, R.286, Y.320 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.97, A:N.213 Hydrogen bonds: A:E.37, A:R.70, A:Y.262 Salt bridges: A:R.36, A:R.211, A:R.286 G39.2: 15 residues within 4Å: Chain B: R.36, E.37, D.69, R.70, W.97, I.141, R.143, S.165, E.195, E.196, R.211, N.213, Y.262, R.286, Y.320 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:W.97, B:I.141, B:E.195 Hydrogen bonds: B:E.37, B:R.70, B:Y.262 Salt bridges: B:R.36, B:R.211, B:R.286 G39.3: 14 residues within 4Å: Chain C: R.36, E.37, D.69, R.70, W.97, R.143, S.165, E.195, E.196, R.211, N.213, Y.262, R.286, Y.320 8 PLIP interactions: 8 interactions with chain C Hydrophobic interactions: C:W.97, C:E.195 Hydrogen bonds: C:E.37, C:R.70, C:Y.262 Salt bridges: C:R.36, C:R.211, C:R.286 G39.4: 14 residues within 4Å: Chain D: R.36, E.37, D.69, R.70, W.97, R.143, S.165, E.195, E.196, R.211, N.213, Y.262, R.286, Y.320 8 PLIP interactions: 8 interactions with chain D Hydrophobic interactions: D:W.97, D:E.195 Hydrogen bonds: D:E.37, D:R.70, D:Y.262 Salt bridges: D:R.36, D:R.211, D:R.286

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Russell, R.J. et al., The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design. Nature (2006)

Release Date

2006-09-05

Peptides

Neuraminidase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Neuraminidase

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