SMTL ID : 2huk.1

Crystal structure of T4 Lysozyme V131C synthetic dimer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: T.142, P.143, N.144, R.145 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.144, A:N.144, A:R.145 Water bridges: A:R.148 SO4.2: 3 residues within 4Å: Chain A: R.14, L.15, K.16 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.15, A:K.16 Water bridges: A:K.16 SO4.3: 6 residues within 4Å: Chain A: G.113, F.114, T.115, N.116, S.117, N.132 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.116, A:N.116, A:S.117, A:S.117, A:N.132 Water bridges: A:G.113 SO4.4: 2 residues within 4Å: Chain A: N.132, K.135 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.135 SO4.5: 4 residues within 4Å: Chain B: T.142, P.143, N.144, R.145 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.144, B:N.144, B:R.145 Water bridges: B:R.148 SO4.6: 3 residues within 4Å: Chain B: R.14, L.15, K.16 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:L.15, B:K.16 Water bridges: B:K.16 SO4.7: 6 residues within 4Å: Chain B: G.113, F.114, T.115, N.116, S.117, N.132 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.116, B:N.116, B:S.117, B:S.117, B:N.132 Water bridges: B:G.113 SO4.8: 2 residues within 4Å: Chain B: N.132, K.135 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:K.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Banatao, D.R. et al., An approach to crystallizing proteins by synthetic symmetrization. Proc.Natl.Acad.Sci.Usa (2006)

Release Date

2006-10-17

Peptides

Lysozyme: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Lysozyme

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