SMTL ID : 2hun.1

Crystal structure of hypothetical protein PH0414 from Pyrococcus horikoshii OT3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 29 residues within 4Å: Chain A: G.10, M.12, G.13, F.14, I.15, D.36, K.37, L.38, G.39, Y.40, G.41, S.42, G.61, D.62, V.63, L.82, A.83, A.84, S.86, S.101, V.125, S.126, T.127, Y.151, K.155, C.178, T.179, N.180, N.181 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:I.15 Hydrogen bonds: A:M.12, A:M.12, A:F.14, A:I.15, A:K.37, A:K.37, A:L.38, A:G.39, A:G.39, A:G.41, A:D.62, A:V.63, A:L.82, A:A.84, A:S.101, A:S.101, A:K.155, A:N.181, A:N.181 Water bridges: A:G.13, A:G.16, A:S.86, A:S.86, A:Q.186, A:Q.186 NAD.2: 29 residues within 4Å: Chain B: G.10, M.12, G.13, F.14, I.15, D.36, K.37, L.38, G.39, Y.40, G.41, S.42, G.61, D.62, V.63, L.82, A.83, A.84, S.86, S.101, V.125, S.126, T.127, Y.151, K.155, C.178, T.179, N.180, N.181 22 PLIP interactions: 22 interactions with chain B Hydrophobic interactions: B:I.15 Hydrogen bonds: B:M.12, B:M.12, B:F.14, B:I.15, B:K.37, B:K.37, B:L.38, B:G.39, B:G.39, B:G.41, B:V.63, B:L.82, B:A.84, B:S.86, B:S.101, B:S.101, B:K.155, B:N.181 Water bridges: B:Q.186, B:Q.186 pi-Cation interactions: B:H.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamamoto, H. et al., Crystal structure of hypothetical protein PH0414 from Pyrococcus horikoshii OT3. To be Published

Release Date

2007-01-26

Peptides

336aa long hypothetical dTDP-glucose 4,6-dehydratase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

336aa long hypothetical dTDP-glucose 4,6-dehydratase