SMTL ID : 2hup.2 (1 other biounit)

Crystal structure of human RAB43 in complex with GDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: T.43 Ligands: GDP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.43, H2O.1, H2O.1, H2O.1, H2O.1

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 17 residues within 4Å: Chain A: D.37, A.38, S.39, V.40, G.41, K.42, T.43, C.44, F.54, N.142, K.143, D.145, L.146, S.173, A.174, K.175 Ligands: MG.1 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:D.37, A:S.39, A:V.40, A:G.41, A:K.42, A:T.43, A:C.44, A:N.142, A:K.143, A:K.143, A:A.174, A:K.175 Water bridges: A:K.42, A:K.42, A:T.43, A:D.84, A:A.86 Salt bridges: A:K.42, A:D.145 pi-Stacking: A:F.54, A:F.54

1 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 5 residues within 4Å: Chain A: C.44, Q.47, R.48, A.53, F.54 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, J. et al., Crystal structure of human RAB43 in complex with GDP. To be Published

Release Date

2006-08-08

Peptides

RAS-related protein RAB-43: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

RAS-related protein RAB-43

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