SMTL ID : 2hyt.1

CRYSTAL STRUCTURE OF A TETR-FAMILY TRANSCRIPTIONAL REGULATOR (ECA1819) FROM PECTOBACTERIUM ATROSEPTICUM AT 1.64 A RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

homo-dimer

Ligands

10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: L.75, R.92, Y.96, M.132, Y.158, L.161 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.92, A:R.92 EDO.2: 6 residues within 4Å: Chain A: R.126, V.129 Chain B: R.114, E.163, W.167, E.170 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.114, B:R.114, B:E.163 Water bridges: B:W.167 EDO.3: 5 residues within 4Å: Chain A: R.22, E.70, R.74, E.104, I.105 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.74, A:E.104, A:E.104 Water bridges: A:I.105 EDO.4: 4 residues within 4Å: Chain A: R.74, A.95, E.98, E.102 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.74, A:E.98, A:E.98 Water bridges: A:R.74 EDO.5: 8 residues within 4Å: Chain A: G.159, A.162, E.163 Chain B: G.159, A.162, E.163, F.166 Ligands: EDO.10 No protein-ligand interaction detected (PLIP) EDO.6: 6 residues within 4Å: Chain B: L.75, R.92, Y.96, M.132, Y.158, L.161 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.92, B:R.92 EDO.7: 6 residues within 4Å: Chain A: R.114, E.163, W.167, E.170 Chain B: R.126, V.129 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.114, A:R.114 Water bridges: A:W.167, A:E.170 EDO.8: 5 residues within 4Å: Chain B: R.22, E.70, R.74, E.104, I.105 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:E.70, B:R.74, B:E.104 Water bridges: B:I.105 EDO.9: 4 residues within 4Å: Chain B: R.74, A.95, E.98, E.102 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.74, B:E.98 Water bridges: B:R.74 EDO.10: 8 residues within 4Å: Chain A: G.159, A.162, E.163, F.166 Chain B: G.159, A.162, E.163 Ligands: EDO.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of TetR-family transcriptional regulator (YP_049917.1) from Erwinia Cartovora Atroseptica SCRI1043 at 1.64 A resolution. To be published

Release Date

2006-08-15

Peptides

TetR-family transcriptional regulator: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

TetR-family transcriptional regulator