SMTL ID : 2hzh.1

Crystal structure of laccase from Coriolus zonatus at 2.6 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

2 x NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)

NDG.1: 5 residues within 4Å: Chain A: H.153, T.154, A.155, N.158 Ligands: NAG.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.155 NDG.2: 2 residues within 4Å: Chain A: N.333, N.336 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.333, A:N.333, A:N.336

1 x MAN: alpha-D-mannopyranose(Post Translational Modification)

MAN.3: 5 residues within 4Å: Chain A: N.327, S.383, P.385, N.436 Ligands: NAG.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.327, A:S.383

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.4: 4 residues within 4Å: Chain A: A.325, I.326, N.327 Ligands: MAN.3 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:A.325 NAG.5: 7 residues within 4Å: Chain A: D.23, N.54, T.56, M.57, A.155, N.158 Ligands: NDG.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.54, A:T.56, A:N.158

4 x CU: COPPER (II) ION(Non-covalent)

CU.6: 5 residues within 4Å: Chain A: H.395, C.453, I.455, H.458, F.463 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.395, A:C.453, A:H.458 CU.7: 4 residues within 4Å: Chain A: H.111, H.398, H.400, H.452 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.111, A:H.400, A:H.452, H2O.1 CU.8: 6 residues within 4Å: Chain A: H.64, H.66, W.107, H.109, H.454 Ligands: CU.9 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.66, A:H.109, A:H.454, H2O.1 CU.9: 5 residues within 4Å: Chain A: H.64, H.66, H.398, H.400 Ligands: CU.8 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.64, A:H.398

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lyashenko, A.V. et al., Crystal structure of laccase from Coriolus zonatus at 2.6 A resolution. To be published

Release Date

2007-08-14

Peptides

laccase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

laccase