- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.35 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x MN: MANGANESE (II) ION(Non-covalent)
MN.2: 7 residues within 4Å:- Chain A: D.128, Y.161, E.201, E.203, D.235, K.255
- Ligands: DHJ.9
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.128, A:E.201, A:E.203, A:D.235
MN.11: 7 residues within 4Å:- Chain B: D.128, Y.161, E.201, E.203, D.235, K.255
- Ligands: DHJ.17
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:D.128, B:E.201, B:E.203, B:D.235
- 1 x CA: CALCIUM ION(Non-covalent)
- 10 x NI: NICKEL (II) ION(Non-covalent)
NI.4: 2 residues within 4Å:- Chain A: D.13, H.397
6 PLIP interactions:2 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:D.13, A:H.397, H2O.3, H2O.3, H2O.12, H2O.13
NI.5: 1 residues within 4Å:- Chain A: H.156
2 PLIP interactions:1 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.156, H2O.3
NI.6: 1 residues within 4Å:- Chain A: D.401
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:D.401, H2O.15, H2O.18, H2O.18, H2O.18
NI.7: 1 residues within 4Å:- Chain A: H.50
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:H.50, H2O.9, H2O.15, H2O.17, H2O.18
NI.8: 1 residues within 4Å:- Chain A: H.60
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:H.60
NI.12: 1 residues within 4Å:- Chain B: G.1
3 PLIP interactions:1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:G.1, H2O.27, H2O.27
NI.13: 1 residues within 4Å:- Chain B: H.156
6 PLIP interactions:1 interactions with chain B, 5 Ligand-Water interactions- Metal complexes: B:H.156, H2O.19, H2O.30, H2O.30, H2O.31, H2O.36
NI.14: 2 residues within 4Å:- Chain B: D.13, H.397
6 PLIP interactions:2 interactions with chain B, 4 Ligand-Water interactions- Metal complexes: B:D.13, B:H.397, H2O.28, H2O.28, H2O.37, H2O.38
NI.15: 1 residues within 4Å:- Chain B: D.298
6 PLIP interactions:1 interactions with chain B, 5 Ligand-Water interactions- Metal complexes: B:D.298, H2O.21, H2O.35, H2O.36, H2O.37, H2O.38
NI.16: 1 residues within 4Å:- Chain B: H.60
2 PLIP interactions:1 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:H.60, H2O.29
- 2 x DHJ: 4-(2-CARBOXYETHYL)(HYDROXY)PHOSPHORYL]-3-OXOBUTANOIC ACID(Non-covalent)
DHJ.9: 18 residues within 4Å:- Chain A: D.128, F.129, Y.130, H.135, V.139, R.144, Y.161, E.201, E.203, D.235, R.239, Q.242, K.255, G.351, T.352
- Chain B: P.248, L.249
- Ligands: MN.2
13 PLIP interactions:12 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:Y.130, A:Y.130, A:V.139, A:Y.161, B:L.249
- Hydrogen bonds: A:Y.130, A:H.135, A:R.239, A:Q.242, A:K.255, A:T.352
- Salt bridges: A:H.135, A:R.144
DHJ.17: 20 residues within 4Å:- Chain A: P.248, L.249
- Chain B: D.128, F.129, Y.130, H.135, V.139, F.143, R.144, Y.161, E.201, E.203, D.235, R.239, Q.242, Y.246, K.255, G.351, T.352
- Ligands: MN.11
14 PLIP interactions:13 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:Y.130, B:V.139, B:Y.161, A:L.249
- Hydrogen bonds: B:D.128, B:H.135, B:Y.161, B:R.239, B:Q.242, B:K.255, B:T.352, B:T.352
- Salt bridges: B:H.135, B:R.144
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bateman, R.L. et al., Slow-onset inhibition of fumarylacetoacetate hydrolase by phosphinate mimics of the tetrahedral intermediate: kinetics, crystal structure and pharmacokinetics. Biochem.J. (2007)
- Release Date
- 2006-08-22
- Peptides
- Fumarylacetoacetase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.35 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x MN: MANGANESE (II) ION(Non-covalent)
- 1 x CA: CALCIUM ION(Non-covalent)
- 10 x NI: NICKEL (II) ION(Non-covalent)
- 2 x DHJ: 4-(2-CARBOXYETHYL)(HYDROXY)PHOSPHORYL]-3-OXOBUTANOIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bateman, R.L. et al., Slow-onset inhibition of fumarylacetoacetate hydrolase by phosphinate mimics of the tetrahedral intermediate: kinetics, crystal structure and pharmacokinetics. Biochem.J. (2007)
- Release Date
- 2006-08-22
- Peptides
- Fumarylacetoacetase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B