SMTL ID : 2i2q.1

Fission Yeast cofilin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: S.2, F.3, S.4, D.104, T.105, R.108 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.2, A:F.3, A:S.4 Water bridges: A:S.101, A:T.105 Salt bridges: A:R.108 SO4.2: 2 residues within 4Å: Chain A: P.92, I.93 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.93 Water bridges: A:K.94

1 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)

LDA.3: 5 residues within 4Å: Chain A: L.54, L.57, W.86, D.121 Ligands: EDO.7 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.54, A:W.86

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 5 residues within 4Å: Chain A: E.42, D.56, L.57, P.58, R.63 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.42, A:R.63 EDO.5: 2 residues within 4Å: Chain A: S.45, T.46 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.46, A:T.46 Water bridges: A:K.43, A:S.45 EDO.6: 3 residues within 4Å: Chain A: V.8, P.10, L.13 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.8 Water bridges: A:V.8 EDO.7: 4 residues within 4Å: Chain A: L.54, I.84, W.86 Ligands: LDA.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Andrianantoandro, E. et al., Mechanism of Actin Filament Turnover by Severing and Nucleation at Different Concentrations of ADF/Cofilin. Mol.Cell (2006)

Release Date

2006-10-17

Peptides

Cofilin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cofilin