SMTL ID : 2i5p.1

Crystal structure of glyceraldehyde-3-phosphate dehydrogenase isoform 1 from K. marxianus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x GLC: alpha-D-glucopyranose(Non-covalent)

GLC.1: 6 residues within 4Å: Chain A: D.52, A.55, Y.56, V.71, S.72, H.73 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.52, A:A.55, A:Y.56, A:V.71, A:H.73 GLC.3: 7 residues within 4Å: Chain B: D.52, A.55, Y.56, K.59, Y.60, V.71, S.72 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.52

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.2: 1 residues within 4Å: Chain A: T.221 No protein-ligand interaction detected (PLIP) BME.4: 2 residues within 4Å: Chain B: I.191, T.221 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ferreira-da-Silva, F. et al., The Crystal and Solution Structures of Glyceraldehyde-3-phosphate Dehydrogenase Reveal Different Quaternary Structures. J.Biol.Chem. (2006)

Release Date

2006-09-12

Peptides

Glyceraldehyde-3-phosphate dehydrogenase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
O

B
P

Glyceraldehyde-3-phosphate dehydrogenase 1