SMTL ID : 2i9p.1

Crystal structure of human hydroxyisobutyrate dehydrogenase complexed with NAD+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 24 residues within 4Å: Chain A: I.28, G.29, G.31, N.32, M.33, G.34, Y.51, D.52, V.53, F.54, M.85, L.86, P.87, N.91, T.117, V.142, G.144, G.145, V.146, K.192, F.260, L.264, K.267, D.268 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:V.142, A:F.260 Hydrogen bonds: A:G.31, A:N.32, A:M.33, A:G.34, A:V.53, A:F.54, A:L.86, A:T.117, A:V.146, A:K.267, A:K.267 NAD.2: 24 residues within 4Å: Chain B: I.28, G.29, G.31, N.32, M.33, G.34, Y.51, D.52, V.53, F.54, M.85, L.86, P.87, N.91, T.117, V.142, G.144, G.145, V.146, K.192, F.260, L.264, K.267, D.268 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:V.142, B:F.260 Hydrogen bonds: B:G.31, B:N.32, B:N.32, B:M.33, B:G.34, B:V.53, B:F.54, B:L.86, B:N.91, B:N.91, B:T.117, B:T.117, B:V.146, B:K.192, B:K.267, B:K.267 NAD.3: 25 residues within 4Å: Chain C: I.28, G.29, G.31, N.32, M.33, G.34, Y.51, D.52, V.53, F.54, M.85, L.86, P.87, N.91, A.95, T.117, V.142, G.144, G.145, V.146, K.192, F.260, L.264, K.267, D.268 15 PLIP interactions: 15 interactions with chain C Hydrophobic interactions: C:V.142 Hydrogen bonds: C:G.31, C:N.32, C:M.33, C:G.34, C:V.53, C:F.54, C:L.86, C:N.91, C:T.117, C:T.117, C:V.146, C:K.192, C:K.267, C:K.267 NAD.4: 25 residues within 4Å: Chain D: I.28, G.29, L.30, G.31, N.32, M.33, G.34, Y.51, D.52, V.53, F.54, M.85, L.86, P.87, N.91, T.117, V.142, G.144, G.145, V.146, K.192, F.260, L.264, K.267, D.268 19 PLIP interactions: 19 interactions with chain D Hydrophobic interactions: D:V.142, D:F.260 Hydrogen bonds: D:L.30, D:L.30, D:G.31, D:N.32, D:N.32, D:M.33, D:G.34, D:V.53, D:F.54, D:L.86, D:N.91, D:T.117, D:T.117, D:V.146, D:K.192, D:K.267, D:K.267

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kavanagh, K.L. et al., Crystal structure of human hydroxyisobutyrate dehydrogenase complexed with NAD+. To be Published

Release Date

2006-09-26

Peptides

3-hydroxyisobutyrate dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

3-hydroxyisobutyrate dehydrogenase