SMTL ID : 2i9x.1

Structural Genomics, the crystal structure of SpoVG conserved domain from Staphylococcus epidermidis ATCC 12228

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: D.8, R.10, S.25, I.26, T.27, V.33, H.35 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.25 Water bridges: A:T.27 EDO.2: 6 residues within 4Å: Chain B: H.65, P.66, I.67, N.68, S.69, R.72 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.65, B:R.72 EDO.3: 4 residues within 4Å: Chain A: V.6, D.8, V.9, V.82 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.8, A:D.8, A:V.9 EDO.4: 5 residues within 4Å: Chain A: N.2, A.3, M.4 Chain B: D.29, A.31 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.2, B:D.29 EDO.5: 3 residues within 4Å: Chain B: G.42, N.43, S.44 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.43, B:N.43, B:S.44 Water bridges: B:G.42, B:G.42, B:S.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., The crystal structure of SpoVG from Staphylococcus epidermidis ATCC 12228. To be Published

Release Date

2006-10-03

Peptides

Putative septation protein spoVG: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative septation protein spoVG