SMTL ID : 2iak.2 (2 other biounits)

Crystal Structure of a protease resistant fragment of the plakin domain of Bullous Pemphigoid Antigen1 (BPAG1)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-hexamer

Ligands

12 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: I.176, Q.205, W.208 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.205 SO4.2: 4 residues within 4Å: Chain A: K.97 Chain D: Q.30, K.97 Ligands: SO4.8 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain A Salt bridges: D:K.97, A:K.97 SO4.3: 3 residues within 4Å: Chain B: I.176, Q.205, W.208 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.205 SO4.4: 4 residues within 4Å: Chain B: K.97 Chain F: Q.30, K.97 Ligands: SO4.12 2 PLIP interactions: 1 interactions with chain F, 1 interactions with chain B Salt bridges: F:K.97, B:K.97 SO4.5: 3 residues within 4Å: Chain C: I.176, Q.205, W.208 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:Q.205 SO4.6: 4 residues within 4Å: Chain C: K.97 Chain E: Q.30, K.97 Ligands: SO4.10 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain E Salt bridges: C:K.97, E:K.97 SO4.7: 3 residues within 4Å: Chain D: I.176, Q.205, W.208 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:Q.205 SO4.8: 4 residues within 4Å: Chain A: Q.30, K.97 Chain D: K.97 Ligands: SO4.2 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain A Salt bridges: D:K.97, A:K.97 SO4.9: 3 residues within 4Å: Chain E: I.176, Q.205, W.208 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:Q.205 SO4.10: 4 residues within 4Å: Chain C: Q.30, K.97 Chain E: K.97 Ligands: SO4.6 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain E Salt bridges: C:K.97, E:K.97 SO4.11: 3 residues within 4Å: Chain F: I.176, Q.205, W.208 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:Q.205 SO4.12: 4 residues within 4Å: Chain B: Q.30, K.97 Chain F: K.97 Ligands: SO4.4 2 PLIP interactions: 1 interactions with chain F, 1 interactions with chain B Salt bridges: F:K.97, B:K.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jefferson, J.J. et al., Structural analysis of the plakin domain of bullous pemphigoid antigen1 (BPAG1) suggests that plakins are members of the spectrin superfamily. J.Mol.Biol. (2007)

Release Date

2006-11-28

Peptides

Bullous pemphigoid antigen 1, isoform 5: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

Bullous pemphigoid antigen 1, isoform 5

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