SMTL ID : 2ib5.1 (2 other biounits)

Structural characterization of a blue chromoprotein and its yellow mutant from the sea anemone cnidopus japonicus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-octamer

Ligands

16 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 6 residues within 4Å: Chain A: H.174, R.176 Chain D: H.174, R.176 Ligands: PO4.2, PO4.7 Ligand excluded by PLIP PO4.2: 7 residues within 4Å: Chain A: I.96, Y.102 Chain B: I.96, Y.102 Ligands: PO4.1, PO4.4, PO4.7 Ligand excluded by PLIP PO4.3: 4 residues within 4Å: Chain A: E.142, H.170 Chain D: P.192, F.193 Ligand excluded by PLIP PO4.4: 6 residues within 4Å: Chain A: Y.102 Chain B: H.174, R.176 Chain C: H.174 Ligands: PO4.2, PO4.7 Ligand excluded by PLIP PO4.5: 5 residues within 4Å: Chain B: E.142, K.164, H.170 Chain C: P.192, F.193 Ligand excluded by PLIP PO4.6: 4 residues within 4Å: Chain B: P.192, F.193 Chain C: E.142, H.170 Ligand excluded by PLIP PO4.7: 7 residues within 4Å: Chain C: I.96, Y.102 Chain D: I.96, Y.102 Ligands: PO4.1, PO4.2, PO4.4 Ligand excluded by PLIP PO4.8: 4 residues within 4Å: Chain A: P.192, F.193 Chain D: E.142, H.170 Ligand excluded by PLIP PO4.9: 5 residues within 4Å: Chain E: G.168, H.170 Chain H: T.150, P.192, F.193 Ligand excluded by PLIP PO4.10: 6 residues within 4Å: Chain E: Y.102 Chain F: H.174, R.176 Chain G: H.174 Ligands: PO4.11, PO4.13 Ligand excluded by PLIP PO4.11: 7 residues within 4Å: Chain E: I.96, Y.102 Chain F: I.96, Y.102 Ligands: PO4.10, PO4.13, PO4.15 Ligand excluded by PLIP PO4.12: 5 residues within 4Å: Chain F: E.142, K.164, H.170 Chain G: P.192, F.193 Ligand excluded by PLIP PO4.13: 7 residues within 4Å: Chain G: I.96, Y.102 Chain H: I.96, Y.102 Ligands: PO4.10, PO4.11, PO4.15 Ligand excluded by PLIP PO4.14: 6 residues within 4Å: Chain A: K.186 Chain F: P.192, F.193 Chain G: E.142, K.164, H.170 Ligand excluded by PLIP PO4.15: 6 residues within 4Å: Chain E: H.174 Chain G: Y.102 Chain H: H.174, R.176 Ligands: PO4.11, PO4.13 Ligand excluded by PLIP PO4.16: 5 residues within 4Å: Chain E: P.192, F.193 Chain H: E.142, K.164, H.170 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chan, M.C.Y. et al., Structural Characterization of a Blue Chromoprotein and Its Yellow Mutant from the Sea Anemone Cnidopus Japonicus. J.Biol.Chem. (2006)

Release Date

2006-10-10

Peptides

Chromo protein: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

Chromo protein

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