- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.1: 4 residues within 4Å:- Chain A: P.86, C.87
- Chain B: N.382, G.386
Ligand excluded by PLIPCL.6: 4 residues within 4Å:- Chain A: N.382, G.386
- Chain B: P.86, C.87
Ligand excluded by PLIPCL.9: 4 residues within 4Å:- Chain C: P.86, C.87
- Chain D: N.382, G.386
Ligand excluded by PLIPCL.12: 4 residues within 4Å:- Chain C: N.382, G.386
- Chain D: P.86, C.87
Ligand excluded by PLIP- 4 x K: POTASSIUM ION(Non-covalent)
K.2: 6 residues within 4Å:- Chain A: Y.187, A.248, A.249, A.251, T.253, V.349
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:Y.187, A:A.249, A:A.251, A:V.349, H2O.6
K.7: 6 residues within 4Å:- Chain B: Y.187, A.248, A.249, A.251, T.253, V.349
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:Y.187, B:A.249, B:A.251, B:V.349, H2O.18
K.10: 6 residues within 4Å:- Chain C: Y.187, A.248, A.249, A.251, T.253, V.349
5 PLIP interactions:4 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:Y.187, C:A.249, C:A.251, C:V.349, H2O.28
K.13: 6 residues within 4Å:- Chain D: Y.187, A.248, A.249, A.251, T.253, V.349
5 PLIP interactions:4 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:Y.187, D:A.249, D:A.251, D:V.349, H2O.38
- 4 x COA: COENZYME A(Non-covalent)
COA.3: 21 residues within 4Å:- Chain A: L.152, H.160, M.161, Y.187, R.226, V.227, D.228, K.231, V.232, L.235, F.239, A.248, A.249, S.252, T.253, L.254, F.293, A.323, F.324, H.353
- Ligands: MES.4
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:F.239, A:L.254
- Hydrogen bonds: A:Y.187, A:D.228, A:K.231, A:S.252, A:S.252
- Water bridges: A:Y.187, A:L.254
- Salt bridges: A:K.231
COA.8: 19 residues within 4Å:- Chain B: C.94, L.152, H.160, M.161, Y.187, R.226, V.227, D.228, K.231, V.232, L.235, F.239, A.248, A.249, S.252, F.293, A.323, F.324, H.353
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:F.239
- Hydrogen bonds: B:Y.187, B:D.228, B:K.231, B:S.252, B:S.252, B:S.252
- Water bridges: B:Y.187, B:K.231, B:L.254
- Salt bridges: B:K.231
COA.11: 22 residues within 4Å:- Chain C: C.94, L.152, H.160, M.161, Y.187, R.226, V.227, D.228, K.231, V.232, L.235, V.238, F.239, A.248, A.249, S.252, T.253, L.254, F.293, A.323, F.324, H.353
11 PLIP interactions:11 interactions with chain C- Hydrophobic interactions: C:F.239, C:L.254
- Hydrogen bonds: C:Y.187, C:D.228, C:K.231, C:S.252, C:S.252, C:S.252
- Water bridges: C:Y.187, C:L.254
- Salt bridges: C:K.231
COA.14: 18 residues within 4Å:- Chain D: C.94, L.152, H.160, Y.187, R.226, V.227, D.228, K.231, V.232, L.235, F.239, A.248, A.249, S.252, T.253, A.323, F.324, H.353
10 PLIP interactions:10 interactions with chain D- Hydrophobic interactions: D:F.239
- Hydrogen bonds: D:Y.187, D:D.228, D:K.231, D:S.252, D:S.252
- Water bridges: D:Y.187, D:Y.187, D:L.254
- Salt bridges: D:K.231
- 1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
MES.4: 5 residues within 4Å:- Chain A: F.23, L.24, L.254
- Chain C: Y.138
- Ligands: COA.3
1 PLIP interactions:1 interactions with chain C- Water bridges: C:Y.138
- 1 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 6 residues within 4Å:- Chain A: A.169, K.170, N.173, I.174, A.175, T.245
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.173, A:N.173
- Water bridges: A:E.166, A:E.166
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Haapalainen, A.M. et al., Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function. Biochemistry (2007)
- Release Date
- 2007-04-03
- Peptides
- Acetyl-CoA acetyltransferase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x K: POTASSIUM ION(Non-covalent)
- 4 x COA: COENZYME A(Non-covalent)
- 1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
- 1 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Haapalainen, A.M. et al., Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function. Biochemistry (2007)
- Release Date
- 2007-04-03
- Peptides
- Acetyl-CoA acetyltransferase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D