SMTL ID : 2id3.2 (3 other biounits)

Crystal structure of transcriptional regulator SCO5951 from Streptomyces coelicolor A3(2)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-tetramer

Ligands

16 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: D.104, D.166 Chain D: E.97 5 PLIP interactions: 2 interactions with chain A, 1 interactions with chain D, 2 Ligand-Water interactions Metal complexes: A:D.104, A:D.166, D:E.97, H2O.4, H2O.9 CA.2: 3 residues within 4Å: Chain A: D.56 Chain B: D.56 Ligands: CA.7 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.56, B:D.56, H2O.6, H2O.6, H2O.15 CA.3: 3 residues within 4Å: Chain A: E.97 Chain D: D.104, D.166 5 PLIP interactions: 1 interactions with chain A, 2 interactions with chain D, 2 Ligand-Water interactions Metal complexes: A:E.97, D:D.104, D:D.166, H2O.4, H2O.31 CA.6: 3 residues within 4Å: Chain B: D.104, D.166 Chain C: E.97 5 PLIP interactions: 1 interactions with chain C, 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: C:E.97, B:D.104, B:D.166, H2O.14, H2O.18 CA.7: 3 residues within 4Å: Chain A: D.56 Chain B: D.56 Ligands: CA.2 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.56, A:D.56, H2O.6, H2O.15, H2O.16 CA.8: 3 residues within 4Å: Chain B: E.97 Chain C: D.104, D.166 5 PLIP interactions: 2 interactions with chain C, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: C:D.104, C:D.166, B:E.97, H2O.13, H2O.21 CA.11: 1 residues within 4Å: Chain C: D.62 2 PLIP interactions: 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:D.62, H2O.26 CA.12: 2 residues within 4Å: Chain B: E.159 Chain C: E.159 5 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C, 2 Ligand-Water interactions Metal complexes: B:E.159, C:E.159, C:E.159, H2O.10, H2O.19 CA.13: 2 residues within 4Å: Chain C: E.65, R.69 4 PLIP interactions: 2 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.65, C:E.65, H2O.19, H2O.20 CA.14: 2 residues within 4Å: Chain C: C.141 Ligands: CA.15 2 PLIP interactions: 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:C.141, H2O.21 CA.15: 2 residues within 4Å: Chain C: C.141 Ligands: CA.14 2 PLIP interactions: 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:C.141, H2O.23 CA.17: 1 residues within 4Å: Chain D: D.62 2 PLIP interactions: 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:D.62, H2O.35 CA.18: 2 residues within 4Å: Chain A: E.159 Chain D: E.159 5 PLIP interactions: 2 interactions with chain D, 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: D:E.159, D:E.159, A:E.159, H2O.1, H2O.28 CA.19: 2 residues within 4Å: Chain D: E.65, R.69 4 PLIP interactions: 2 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:E.65, D:E.65, H2O.28, H2O.30 CA.20: 2 residues within 4Å: Chain D: C.141 Ligands: CA.21 2 PLIP interactions: 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:C.141, H2O.30 CA.21: 2 residues within 4Å: Chain D: C.141 Ligands: CA.20 2 PLIP interactions: 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:C.141, H2O.33

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain A: Y.153, R.156, S.187, Y.191 Ligand excluded by PLIP CL.5: 3 residues within 4Å: Chain A: D.62, L.63, P.84 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain B: Y.153, R.156, S.187, Y.191 Ligand excluded by PLIP CL.10: 3 residues within 4Å: Chain B: D.62, L.63, P.84 Ligand excluded by PLIP CL.16: 4 residues within 4Å: Chain C: Y.153, R.156, S.187, Y.191 Ligand excluded by PLIP CL.22: 4 residues within 4Å: Chain D: Y.153, R.156, S.187, Y.191 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

 - 

Release Date

2006-10-17

Peptides

Putative transcriptional regulator: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
B

D
B

Putative transcriptional regulator

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