SMTL ID : 2iii.1

Crystal structure of the adenosylmethionine decarboxylase (aq_254) from aquifex aeolicus vf5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: D.19, D.22, D.26 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.19, A:D.22, A:D.26, H2O.2, H2O.4 MG.3: 3 residues within 4Å: Chain B: D.19, D.22, D.26 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.19, B:D.22, B:D.26, H2O.6, H2O.7

2 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: E.32, K.42, S.45, Y.47 No protein-ligand interaction detected (PLIP) CA.4: 4 residues within 4Å: Chain B: E.32, K.42, S.45, Y.47 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jeyakanthan, J. et al., Crystal structure of the adenosylmethionine decarboxylase (aq_254) from aquifex aeolicus vf5. To be Published

Release Date

2007-10-09

Peptides

S-adenosylmethionine decarboxylase proenzyme: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

S-adenosylmethionine decarboxylase proenzyme