SMTL ID : 2ijg.1

Crystal Structure of cryptochrome 3 from Arabidopsis thaliana

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 25 residues within 4Å: Chain A: Y.273, S.286, T.287, K.288, F.289, S.290, L.293, E.326, L.327, W.329, R.330, F.333, F.389, N.392, R.395, Q.396, F.417, L.421, D.423, Y.424, D.425, S.428, N.429, N.432, W.433 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:R.395, A:Q.396, A:F.417, A:N.432, A:W.433 Hydrogen bonds: A:Y.273, A:Y.273, A:S.286, A:T.287, A:K.288, A:F.289, A:S.290, A:N.392, A:N.392, A:R.395, A:D.423, A:D.423, A:D.425, A:S.428, A:N.432, A:N.432 Water bridges: A:R.277, A:S.290, A:N.392

1 x MHF: 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID(Non-covalent)

MHF.2: 13 residues within 4Å: Chain A: H.84, K.90, C.147, S.148, E.149, E.150, N.342, F.345, H.346, E.418, Y.424, P.426, Y.430 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:N.342, A:F.345 Hydrogen bonds: A:K.90, A:E.149, A:N.342, A:E.418, A:Y.424, A:Y.424, A:Y.424, A:Y.430 Water bridges: A:H.84 Salt bridges: A:E.149, A:E.150, A:H.346, A:E.418

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, Y. et al., Crystal structure of cryptochrome 3 from Arabidopsis thaliana and its implications for photolyase activity. Proc.Natl.Acad.Sci.Usa (2006)

Release Date

2006-11-28

Peptides

Cryptochrome DASH, chloroplast/mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Cryptochrome DASH, chloroplast/mitochondrial

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