SMTL ID : 2iml.1 (1 other biounit)

Crystal structure of a hypothetical protein from Archaeoglobus fulgidus binding riboflavin 5'-phosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 14 residues within 4Å: Chain A: E.16, N.29, A.31, P.32, I.33, G.34, K.48, L.49, Y.50, N.52, R.53, T.54, S.79, L.142 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:P.32, A:L.142 Hydrogen bonds: A:N.29, A:P.32, A:G.34, A:K.48, A:Y.50, A:N.52, A:N.52, A:R.53, A:T.54, A:S.79 Water bridges: A:S.78

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: N.132, S.136 Chain B: I.131, N.132, S.136 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:N.132, B:N.132, A:N.132, A:N.132 GOL.3: 6 residues within 4Å: Chain A: R.163, Y.166, Y.167 Chain B: R.163, Y.166, Y.167 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.163, A:Y.167, B:R.163 Water bridges: A:H.144, A:Y.166, A:Y.167 GOL.4: 3 residues within 4Å: Chain A: R.51, R.55, S.111 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.55, A:R.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bonanno, J.B. et al., Crystal structure of a hypothetical protein from Archaeoglobus fulgidus binding riboflavin 5'-phosphate. To be Published

Release Date

2006-10-17

Peptides

Hypothetical protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Hypothetical protein

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