- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.1: 5 residues within 4Å:- Chain A: E.330, N.332, K.498
- Ligands: MG.2, ADP.4
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.330, A:E.330, H2O.18, H2O.18
MG.2: 4 residues within 4Å:- Chain A: D.318, E.330
- Ligands: MG.1, ADP.4
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.318, A:E.330, H2O.18, H2O.18
MG.5: 5 residues within 4Å:- Chain B: E.330, N.332, K.498
- Ligands: MG.6, ADP.8
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.330, B:E.330, H2O.35, H2O.35
MG.6: 5 residues within 4Å:- Chain B: D.318, E.330, N.332
- Ligands: MG.5, ADP.8
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.318, B:E.330, H2O.35, H2O.35
- 2 x CYS: CYSTEINE(Non-covalent)
CYS.3: 6 residues within 4Å:- Chain A: S.337, C.338, E.341, R.598, K.607, I.611
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:S.337, A:R.598, A:K.607
- Water bridges: A:R.316, A:S.337
- Salt bridges: A:R.316, A:R.598
CYS.7: 6 residues within 4Å:- Chain B: S.337, C.338, E.341, R.598, K.607, I.611
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:S.337, B:S.337, B:S.337
- Water bridges: B:R.598
- Salt bridges: B:R.598
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.4: 25 residues within 4Å:- Chain A: D.318, Y.329, E.330, K.498, L.515, A.531, K.533, G.537, R.538, C.539, G.540, S.541, L.545, Q.568, Q.569, L.570, W.571, C.572, L.573, Q.582, L.603, V.604, I.605
- Ligands: MG.1, MG.2
21 PLIP interactions:21 interactions with chain A- Hydrogen bonds: A:K.533, A:G.537, A:C.539, A:G.540, A:S.541, A:Q.569, A:W.571, A:Q.582, A:I.605
- Water bridges: A:E.330, A:N.332, A:N.332, A:N.332, A:K.498, A:C.539, A:Q.582
- Salt bridges: A:K.498, A:K.498, A:K.533
- pi-Stacking: A:Y.329, A:Y.329
ADP.8: 25 residues within 4Å:- Chain B: D.318, Y.329, E.330, K.498, L.515, A.531, K.533, G.537, R.538, C.539, G.540, S.541, L.545, Q.568, Q.569, L.570, W.571, C.572, L.573, Q.582, L.603, V.604, I.605
- Ligands: MG.5, MG.6
21 PLIP interactions:21 interactions with chain B- Hydrogen bonds: B:E.330, B:E.330, B:K.533, B:C.539, B:G.540, B:S.541, B:Q.569, B:W.571, B:Q.582, B:Q.582, B:I.605
- Water bridges: B:N.332, B:N.332, B:N.332, B:K.498, B:Q.582
- Salt bridges: B:K.498, B:K.498, B:K.533
- pi-Stacking: B:Y.329, B:Y.329
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pai, C.H. et al., Dual binding sites for translocation catalysis by Escherichia coli glutathionylspermidine synthetase. Embo J. (2006)
- Release Date
- 2006-12-12
- Peptides
- Bifunctional glutathionylspermidine synthetase/amidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 2 x CYS: CYSTEINE(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pai, C.H. et al., Dual binding sites for translocation catalysis by Escherichia coli glutathionylspermidine synthetase. Embo J. (2006)
- Release Date
- 2006-12-12
- Peptides
- Bifunctional glutathionylspermidine synthetase/amidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B