SMTL ID : 2iog.1

Human estrogen receptor alpha ligand-binding domain in complex with compound 11F

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x IOG: N-[(1R)-3-(4-HYDROXYPHENYL)-1-METHYLPROPYL]-2-[2-PHENYL-6-(2-PIPERIDIN-1-YLETHOXY)-1H-INDOL-3-YL]ACETAMIDE(Non-covalent)

IOG.1: 24 residues within 4Å: Chain A: L.38, T.39, A.42, D.43, E.45, L.46, W.75, L.76, L.79, M.80, L.83, R.86, F.96, V.110, E.111, M.113, I.116, F.117, G.213, H.216, L.217, M.220, C.222, K.223 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:L.38, A:L.46, A:W.75, A:L.79, A:L.83, A:L.83, A:F.96, A:V.110, A:M.113, A:I.116, A:I.116, A:F.117, A:H.216, A:L.217, A:L.217, A:L.217, A:K.223 Hydrogen bonds: A:L.79, A:R.86 Water bridges: A:M.35, A:T.39, A:R.86 Salt bridges: A:D.43 pi-Stacking: A:F.96 IOG.2: 24 residues within 4Å: Chain B: L.38, T.39, A.42, D.43, E.45, L.46, W.75, L.76, L.79, M.80, L.83, R.86, F.96, V.110, E.111, M.113, I.116, F.117, G.213, H.216, L.217, M.220, C.222, K.223 24 PLIP interactions: 24 interactions with chain B Hydrophobic interactions: B:L.38, B:L.46, B:W.75, B:L.79, B:L.83, B:L.83, B:F.96, B:V.110, B:M.113, B:I.116, B:I.116, B:F.117, B:H.216, B:L.217, B:L.217, B:L.217, B:K.223 Hydrogen bonds: B:L.79, B:R.86 Water bridges: B:M.35, B:T.39, B:R.86 Salt bridges: B:D.43 pi-Stacking: B:F.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dykstra, K.D. et al., Estrogen receptor ligands. Part 16: 2-Aryl indoles as highly subtype selective ligands for ERalpha. Bioorg.Med.Chem.Lett. (2007)

Release Date

2007-10-09

Peptides

Estrogen receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Estrogen receptor