SMTL ID : 2iok.1

Human estrogen receptor alpha ligand-binding domain in complex with compound 1D

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x IOK: N-[(1R)-3-(4-HYDROXYPHENYL)-1-METHYLPROPYL]-2-(2-PHENYL-1H-INDOL-3-YL)ACETAMIDE(Non-covalent)

IOK.1: 19 residues within 4Å: Chain A: M.43, L.46, T.47, L.49, A.50, E.53, L.84, L.87, M.88, L.91, F.104, V.118, M.121, I.124, L.128, G.221, H.224, L.225, M.228 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.46, A:A.50, A:L.84, A:L.87, A:L.91, A:V.118, A:I.124, A:H.224, A:L.225, A:L.225 Hydrogen bonds: A:R.94 pi-Stacking: A:F.104 IOK.2: 17 residues within 4Å: Chain B: L.46, L.49, A.50, E.53, L.84, L.87, M.88, R.94, F.104, E.119, G.120, M.121, I.124, L.128, G.221, H.224, L.225 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:L.46, B:A.50, B:L.84, B:L.87, B:L.128, B:H.224, B:L.225, B:L.225, B:L.225 Hydrogen bonds: B:E.53, B:E.53 pi-Stacking: B:F.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dykstra, K.D. et al., Estrogen receptor ligands. Part 16: 2-Aryl indoles as highly subtype selective ligands for ERalpha. Bioorg.Med.Chem.Lett. (2007)

Release Date

2007-10-09

Peptides

Estrogen receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Estrogen receptor