SMTL ID : 2ip1.1

Crystal Structure Analysis of S. cerevisiae Tryptophanyl tRNA Synthetase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

4 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.1: 9 residues within 4Å: Chain A: Y.106, R.109, G.110, T.143, E.146, Q.230, Q.259, Y.262, F.263 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.106, A:T.143 Water bridges: A:G.108, A:E.146, A:D.258, A:Q.259 PG4.2: 6 residues within 4Å: Chain A: R.80, K.81, Y.346, D.356, K.360, Y.363 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.346 PG4.3: 9 residues within 4Å: Chain A: Y.188, G.190, G.191, A.192, F.193, E.195, S.238, P.240, N.241 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.192, A:F.193 Water bridges: A:E.195 PG4.4: 5 residues within 4Å: Chain A: F.358, E.361, K.365, E.370, L.371 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.365, A:E.370

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malkowski, M.G. et al., Blocking S-adenosylmethionine synthesis in yeast allows selenomethionine incorporation and multiwavelength anomalous dispersion phasing. Proc.Natl.Acad.Sci.Usa (2007)

Release Date

2007-06-26

Peptides

Tryptophanyl-tRNA synthetase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tryptophanyl-tRNA synthetase