SMTL ID : 2iut.1

P. aeruginosa FtsK motor domain, dimeric

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

2 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)

AGS.1: 21 residues within 4Å: Chain A: M.175, T.222, T.223, G.224, S.225, G.226, K.227, S.228, V.229, E.258, H.430, G.431, G.448, A.449, F.450 Chain B: A.148, V.149, I.150, E.171, R.173 Ligands: MG.2 17 PLIP interactions: 11 interactions with chain A, 6 interactions with chain B Hydrogen bonds: A:G.224, A:S.225, A:G.226, A:K.227, A:S.228, A:S.228, A:V.229, A:H.430, A:G.448, B:V.149, B:E.171, B:R.173 Water bridges: A:K.227, A:S.228, B:A.148, B:V.149, B:E.171 AGS.4: 21 residues within 4Å: Chain A: A.148, V.149, I.150, E.171, R.173 Chain B: M.175, T.222, T.223, G.224, S.225, G.226, K.227, S.228, V.229, E.258, H.430, G.431, G.448, A.449, F.450 Ligands: MG.3 17 PLIP interactions: 4 interactions with chain A, 13 interactions with chain B Hydrogen bonds: A:V.149, A:E.171, A:R.173, B:G.224, B:S.225, B:G.226, B:K.227, B:S.228, B:S.228, B:V.229, B:G.448 Water bridges: A:V.149, B:S.225, B:K.227, B:K.227, B:S.228, B:Q.386

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: S.228, E.258 Ligands: AGS.1 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.228, A:E.258, H2O.3, H2O.4, H2O.7 MG.3: 3 residues within 4Å: Chain B: S.228, E.258 Ligands: AGS.4 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:S.228, B:E.258, H2O.10, H2O.10, H2O.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Massey, T.H. et al., Double-Stranded DNA Translocation: Structure and Mechanism of Hexameric Ftsk. Mol.Cell (2006)

Release Date

2006-08-29

Peptides

DNA TRANSLOCASE FTSK: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA TRANSLOCASE FTSK