SMTL ID : 2iv7.1

Crystal Structure of WaaG, a glycosyltransferase involved in lipopolysaccharide biosynthesis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.1: 20 residues within 4Å: Chain A: F.13, G.14, G.15, L.16, R.18, R.173, V.202, S.204, R.208, K.209, V.234, G.235, G.260, R.261, V.264, E.281, G.284, I.285, V.286, E.289 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:F.13, A:V.202 Hydrogen bonds: A:G.15, A:L.16, A:R.18, A:R.173, A:R.261, A:R.261, A:E.281, A:G.284, A:I.285, A:V.286, A:E.289 Water bridges: A:S.204, A:R.208, A:R.208 Salt bridges: A:R.208, A:K.209, A:K.209

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martinez-Fleites, C. et al., Insights Into the Synthesis of Lipopolysaccharide and Antibiotics Through the Structures of Two Retaining Glycosyltransferases from Family Gt4. Chem.Biol. (2006)

Release Date

2006-10-11

Peptides

LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS PROTEIN RFAG: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS PROTEIN RFAG

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