SMTL ID : 2iwz.1

Human mitochondrial beta-ketoacyl ACP synthase complexed with hexanoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x 6NA: HEXANOIC ACID(Covalent)

6NA.1: 10 residues within 4Å: Chain A: G.132, M.133, A.187, C.188, D.216, F.227, L.366, G.425, F.426 Chain B: L.163 10 PLIP interactions: 9 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:M.133, A:A.187, A:F.227, A:F.227, A:L.366, A:F.426, A:F.426, B:L.163 Hydrogen bonds: A:C.188, A:F.426 6NA.3: 10 residues within 4Å: Chain A: L.163 Chain B: G.132, M.133, A.187, C.188, D.216, F.227, L.366, G.425, F.426 8 PLIP interactions: 1 interactions with chain A, 7 interactions with chain B Hydrophobic interactions: A:L.163, B:A.187, B:F.227, B:F.227, B:L.366, B:F.426 Hydrogen bonds: B:C.188, B:F.426

2 x NH4: AMMONIUM ION(Non-functional Binders)

NH4.2: 6 residues within 4Å: Chain A: N.325, A.326, H.327, E.373, T.421, N.422 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.421, A:N.422, A:N.422 Water bridges: A:K.359, A:A.374 NH4.4: 6 residues within 4Å: Chain B: N.325, A.326, H.327, E.373, T.421, N.422 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:N.325, B:N.422 Water bridges: B:N.325, B:K.359, B:A.374

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Christensen, C.E. et al., Structure of the Human Beta-Ketoacyl [Acp] Synthase from the Mitochondrial Type II Fatty Acid Synthase. Protein Sci. (2007)

Release Date

2007-02-06

Peptides

3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE

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