- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 4 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)
MRD.2: 6 residues within 4Å:- Chain A: V.151, Y.179, H.228, Y.307, M.375
- Ligands: NAD.1
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:V.151
- Hydrogen bonds: A:Y.179, A:Y.307
MRD.3: 7 residues within 4Å:- Chain A: E.391, A.392, F.393, P.394, T.437, I.440, Y.444
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:T.437, A:I.440, A:Y.444
- Hydrogen bonds: A:T.437
MRD.7: 6 residues within 4Å:- Chain B: V.151, Y.179, H.228, Y.307, M.375
- Ligands: NAD.6
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:V.151
MRD.8: 7 residues within 4Å:- Chain B: E.391, A.392, F.393, P.394, T.437, I.440, Y.444
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:T.437, B:I.440, B:Y.444
- Hydrogen bonds: B:T.437, B:T.437, B:Y.444
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.4: 4 residues within 4Å:- Chain A: K.350, W.351, E.354, Y.355
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:W.351, A:E.354
- Water bridges: A:Y.355
MPD.5: 7 residues within 4Å:- Chain A: S.138, E.139, G.142, V.143, P.144, V.397, Y.398
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:E.139, A:V.397, A:Y.398
- Hydrogen bonds: A:G.142, A:V.143
- Water bridges: A:V.397
MPD.9: 4 residues within 4Å:- Chain B: K.350, W.351, E.354, Y.355
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:W.351, B:E.354
- Hydrogen bonds: B:Y.355
- Water bridges: B:Y.355
MPD.10: 7 residues within 4Å:- Chain B: S.138, E.139, G.142, V.143, P.144, V.397, Y.398
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:E.139, B:V.397, B:Y.398
- Hydrogen bonds: B:G.142, B:V.143
- Water bridges: B:V.397
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Liu, Q.P. et al., Bacterial Glycosidases for the Production of Universal Red Blood Cells. Nat.Biotechnol. (2007)
- Release Date
- 2007-04-10
- Peptides
- ALPHA-N-ACETYLGALACTOSAMINIDASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 4 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)
- 4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Liu, Q.P. et al., Bacterial Glycosidases for the Production of Universal Red Blood Cells. Nat.Biotechnol. (2007)
- Release Date
- 2007-04-10
- Peptides
- ALPHA-N-ACETYLGALACTOSAMINIDASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A