SMTL ID : 2iyf.2 (1 other biounit)

The crystal structure of macrolide glycosyltransferases: A blueprint for antibiotic engineering

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ERY: ERYTHROMYCIN A(Non-covalent)

ERY.1: 15 residues within 4Å: Chain A: H.20, W.74, N.81, V.82, F.85, I.112, Y.115, N.134, L.135, V.136, A.137, Y.141, A.183, S.184, D.330 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:W.74, A:W.74, A:N.81, A:F.85, A:I.112, A:L.135, A:Y.141, A:A.183, A:D.330 Hydrogen bonds: A:H.20, A:Y.141, A:S.184 Water bridges: A:R.118, A:S.184 pi-Cation interactions: A:W.74, A:W.74

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.2: 17 residues within 4Å: Chain A: Q.216, R.219, E.222, S.238, G.240, S.241, A.242, Q.268, W.290, V.291, Q.293, H.306, G.308, A.309, G.310, G.311, E.314 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:R.219, A:R.219, A:S.241, A:A.242, A:V.291, A:V.291, A:Q.293, A:G.310, A:G.311, A:E.314 Water bridges: A:L.239, A:H.306, A:A.309, A:A.309 Salt bridges: A:H.306, A:H.306

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 1 residues within 4Å: Chain A: T.318 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.318, H2O.211, H2O.212, H2O.214, H2O.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bolam, D.N. et al., The Crystal Structure of Two Macrolide Glycosyltransferases Provides a Blueprint for Host Cell Antibiotic Immunity. Proc.Natl.Acad.Sci.USA (2007)

Release Date

2007-03-27

Peptides

OLEANDOMYCIN GLYCOSYLTRANSFERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

OLEANDOMYCIN GLYCOSYLTRANSFERASE

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