SMTL ID : 2j0b.1

Structure of the catalytic domain of mouse Manic Fringe in complex with UDP and manganese

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: W.173, V.180, D.181, K.201 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.181 Salt bridges: A:K.201

1 x K: POTASSIUM ION(Non-covalent)

K.2: 5 residues within 4Å: Chain A: A.77, L.185, I.186, L.188, T.193 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:A.77, A:L.185, A:L.188, A:T.193, H2O.2

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.3: 3 residues within 4Å: Chain A: D.103, H.215 Ligands: UDP.4 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.103, A:H.215, H2O.4, H2O.4

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.4: 11 residues within 4Å: Chain A: K.20, T.21, T.22, F.25, R.29, K.81, D.101, D.102, D.103, H.215 Ligands: MN.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.21, A:T.22, A:D.102, A:D.102 Water bridges: A:R.29, A:R.29 Salt bridges: A:R.29, A:H.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jinek, M. et al., Structural Insights Into the Notch-Modifying Glycosyltransferase Fringe. Nat.Struct.Mol.Biol. (2006)

Release Date

2006-09-04

Peptides

BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE MANIC FRINGE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE MANIC FRINGE

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