SMTL ID : 2j1l.1

Crystal Structure of Human Rho-related GTP-binding protein RhoD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 15 residues within 4Å: Chain A: D.42, G.43, G.44, C.45, G.46, K.47, T.48, S.49, K.147, D.149, L.150, S.189, A.190, R.191 Ligands: MG.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:G.44, A:C.45, A:G.46, A:K.47, A:T.48, A:S.49, A:S.49, A:K.147, A:K.147, A:A.190, A:R.191 Water bridges: A:K.47, A:L.50 Salt bridges: A:K.47, A:D.149

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: T.48 Ligands: GDP.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.48, H2O.1, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pike, A.C.W. et al., Crystal Structure of Human Rho-Related GTP-Binding Protein Rhod. To be Published

Release Date

2006-09-18

Peptides

RHO-RELATED GTP-BINDING PROTEIN RHOD: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RHO-RELATED GTP-BINDING PROTEIN RHOD