SMTL ID : 2j41.1 (1 other biounit)

Crystal structure of Staphylococcus aureus guanylate monophosphate kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: P.14, S.15, G.16, V.17, G.18, K.19, G.20 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:P.14, A:G.16, A:V.17, A:G.18, A:K.19, A:G.20 Water bridges: A:K.19 Salt bridges: A:K.19 SO4.2: 7 residues within 4Å: Chain B: P.14, G.16, V.17, G.18, K.19, G.20 Ligands: 5GP.4 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:G.16, B:V.17, B:G.18, B:K.19, B:G.20 Water bridges: B:K.19 Salt bridges: B:K.19

1 x K: POTASSIUM ION(Non-covalent)

K.3: 4 residues within 4Å: Chain B: Y.36, S.39, E.103 Ligands: 5GP.4 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:Y.36, B:S.39, B:E.103, H2O.5, H2O.7

1 x 5GP: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)

5GP.4: 17 residues within 4Å: Chain B: K.19, S.39, R.43, R.46, Y.55, E.74, A.76, Y.78, Y.83, G.84, T.85, E.103, I.104, E.105, G.108 Ligands: SO4.2, K.3 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:K.19, B:S.39, B:Y.55, B:Y.83, B:E.103, B:E.103, B:E.105, B:G.108 Water bridges: B:R.46, B:R.46 Salt bridges: B:R.43, B:R.46, B:E.74, B:E.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

El Omari, K. et al., Structure of Staphylococcus Aureus Guanylate Monophosphate Kinase. Acta Crystallogr.,Sect.F (2006)

Release Date

2006-10-11

Peptides

GUANYLATE KINASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

GUANYLATE KINASE

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