SMTL ID : 2j7l.1

E. coli P Pilus chaperone PapD in complex with a pilus biogenesis inhibitor, pilicide 2c

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x XC2: (3R)-8-CYCLOPROPYL-6-(MORPHOLIN-4-YLMETHYL)-7-(1-NAPHTHYLMETHYL)-5-OXO-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID(Non-covalent)

XC2.1: 6 residues within 4Å: Chain A: L.32, V.56, R.58, P.94, P.95, R.96 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.56 Hydrogen bonds: A:R.58, A:R.96 Salt bridges: A:R.96 XC2.2: 6 residues within 4Å: Chain B: L.32, V.56, R.58, P.94, P.95, R.96 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:V.56 Hydrogen bonds: B:R.58, B:R.96 Salt bridges: B:R.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pinkner, J.S. et al., Rationally Designed Small Compounds Inhibit Pilus Biogenesis in Uropathogenic Bacteria. Proc.Natl.Acad.Sci.USA (2006)

Release Date

2006-11-01

Peptides

CHAPERONE PROTEIN PAPD: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

CHAPERONE PROTEIN PAPD