SMTL ID : 2j7y.1

STRUCTURE OF 17-EPIESTRIOL-BOUND ESTROGEN RECEPTOR BETA LBD IN COMPLEX WITH LXXLL MOTIF FROM NCOA5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x E3O: (16ALPHA,17ALPHA)-ESTRA-1,3,5(10)-TRIENE-3,16,17-TRIOL(Non-covalent)

E3O.1: 16 residues within 4Å: Chain A: M.41, L.44, A.48, E.51, M.82, L.85, M.86, L.89, R.92, F.102, I.119, I.122, F.123, G.218, H.221, L.222 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:A.48, A:L.85, A:L.89, A:I.119, A:I.122, A:F.123 Hydrogen bonds: A:E.51, A:R.92, A:H.221 Water bridges: A:R.92 pi-Stacking: A:F.102

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: E.22, G.88, W.91, R.92, Y.143, K.147 Ligands: EDO.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.22, A:G.88, A:R.92, A:K.147 EDO.3: 6 residues within 4Å: Chain A: P.23, N.25, E.51, R.92 Ligands: EDO.2, BCT.8 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.25, A:E.51, A:E.51, A:R.92 Water bridges: A:R.92 EDO.4: 3 residues within 4Å: Chain A: D.49, Y.234, D.235 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.234, A:D.235 Water bridges: A:D.49 EDO.5: 4 residues within 4Å: Chain A: W.91, R.92, I.94, D.95 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.91, A:D.95, A:D.95 EDO.6: 4 residues within 4Å: Chain A: E.22, W.91, H.140, Y.143 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.22, A:E.22, A:H.140 EDO.7: 5 residues within 4Å: Chain A: S.154, S.155, L.205, L.208, S.209 1 PLIP interactions: 1 interactions with chain A Water bridges: A:S.155

1 x BCT: BICARBONATE ION(Non-functional Binders)

BCT.8: 9 residues within 4Å: Chain A: N.25, V.26, L.47, E.51, R.92, F.102, A.103, P.104 Ligands: EDO.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.26, A:F.102

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.9: 2 residues within 4Å: Chain A: S.69, L.70 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.70 Water bridges: A:S.69, A:L.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pike, A.C.W. et al., Structure of Agonist-Bound Estrogen Receptor Beta Lbd in Complex with Lxxll Motif from Ncoa5. To be Published

Release Date

2006-11-07

Peptides

ESTROGEN RECEPTOR BETA: A
NUCLEAR RECEPTOR COACTIVATOR 5: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ESTROGEN RECEPTOR BETA

NUCLEAR RECEPTOR COACTIVATOR 5

Related Entries With Identical Sequence