SMTL ID : 2j9p.2 (1 other biounit)

Crystal structure of the Bacillus subtilis PBP4a, and its complex with a peptidoglycan mimetic peptide.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x REZ: (2R)-2-AMINO-7-{[(1R)-1-CARBOXYETHYL]AMINO}-7-OXOHEPTANOIC ACID(Covalent)

REZ.1: 15 residues within 4Å: Chain A: A.51, S.52, K.55, P.142, D.145, Y.150, N.301, S.348, I.350, H.352, G.413, S.414, L.415, S.416 Ligands: DAL.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.150, A:I.350, A:I.350, A:L.415 Hydrogen bonds: A:S.52, A:D.145, A:S.414, A:S.414, A:S.416 Salt bridges: A:H.352

1 x DAL: D-ALANINE(Non-covalent)

DAL.2: 7 residues within 4Å: Chain A: S.52, S.299, K.411, T.412, G.413, S.414 Ligands: REZ.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.299, A:S.299, A:T.412 Salt bridges: A:K.411

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sauvage, E. et al., Crystal structure of the Bacillus subtilis penicillin-binding protein 4a, and its complex with a peptidoglycan mimetic peptide. J. Mol. Biol. (2007)

Release Date

2007-07-03

Peptides

D-alanyl-D-alanine carboxypeptidase DacC: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

D-alanyl-D-alanine carboxypeptidase DacC

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