SMTL ID : 2jch.1

Structural and mechanistic basis of penicillin binding protein inhibition by lactivicins

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: K.384, T.492, Q.495, K.512 7 PLIP interactions: 7 interactions with chain A Water bridges: A:F.381, A:K.384, A:K.384, A:T.492, A:K.512 Salt bridges: A:K.384, A:K.512

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: S.563 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: S.555, R.556, V.557 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.555

1 x PL7: (2E)-2-({(2S)-2-CARBOXY-2-[(PHENOXYACETYL)AMINO]ETHOXY}IMINO)PENTANEDIOIC ACID(Covalent)

PL7.4: 12 residues within 4Å: Chain A: A.388, S.389, Y.427, Y.444, S.445, N.447, T.558, T.581, G.582, T.583, N.585, D.587 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.427, A:T.558 Hydrogen bonds: A:S.389, A:S.445, A:S.445, A:N.447, A:T.583, A:T.583, A:T.583 Water bridges: A:W.591 Salt bridges: A:K.580

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Macheboeuf, P. et al., Structural and Mechanistic Basis of Penicillin-Binding Protein Inhibition by Lactivicins. Nat.Chem.Biol. (2007)

Release Date

2007-08-14

Peptides

PENICILLIN-BINDING PROTEIN 1B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PENICILLIN-BINDING PROTEIN 1B

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