SMTL ID : 2jdd.1

Glyphosate N-acetyltransferase bound to acetyl COA and 3-phosphoglycerate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x ACO: ACETYL COENZYME *A(Non-covalent)

ACO.1: 25 residues within 4Å: Chain A: I.19, L.20, G.74, M.75, A.76, T.77, R.82, E.83, Q.84, K.85, A.86, G.87, S.88, C.108, N.109, A.110, R.111, S.113, A.114, G.116, Y.117, Y.118, K.120 Ligands: 3PG.2, SO4.3 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:I.19, A:L.20, A:Y.117 Hydrogen bonds: A:G.74, A:M.75, A:M.75, A:T.77, A:T.77, A:R.82, A:E.83, A:Q.84, A:K.85, A:A.86, A:G.87, A:S.88, A:S.113, A:Y.117 Water bridges: A:E.83, A:K.85, A:K.85, A:R.111, A:G.116 Salt bridges: A:K.85, A:K.120

1 x 3PG: 3-PHOSPHOGLYCERIC ACID(Non-covalent)

3PG.2: 10 residues within 4Å: Chain A: L.20, R.21, F.31, R.73, G.74, R.111, V.135, H.138 Ligands: ACO.1, SO4.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.21, A:R.21, A:G.74 Salt bridges: A:R.21, A:R.21, A:R.73, A:R.111, A:H.138

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 6 residues within 4Å: Chain A: R.21, R.111, V.135, H.138 Ligands: ACO.1, 3PG.2 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.21, A:R.111, A:H.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siehl, D.L. et al., The molecular basis of glyphosate resistance by an optimized microbial acetyltransferase. J. Biol. Chem. (2007)

Release Date

2007-02-13

Peptides

GLYPHOSATE N-ACETYLTRANSFERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GLYPHOSATE N-ACETYLTRANSFERASE

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