SMTL ID : 2jgq.1

Kinetics and structural properties of triosephosphate isomerase from Helicobacter pylori

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

1 x QGA: 1-[(3-CYCLOHEXYLPROPANOYL)(2-HYDROXYETHYL)AMINO]-1-DEOXY-D-ALLITOL(Non-covalent)

QGA.1: 6 residues within 4Å: Chain A: R.128, W.161, S.168, A.169, S.170, D.173 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:R.128, A:W.161 Hydrogen bonds: A:S.168, A:S.168

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 8 residues within 4Å: Chain A: K.9, A.162, I.163, G.164, G.195, S.196, G.217, S.218 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.164, A:S.196, A:S.196, A:G.217, A:S.218 Water bridges: A:G.195, A:V.197, A:A.219 Salt bridges: A:K.9 PO4.3: 8 residues within 4Å: Chain B: K.9, A.162, I.163, G.164, G.195, S.196, G.217, S.218 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:G.164, B:S.196, B:S.196, B:G.217, B:S.218 Water bridges: B:K.9, B:E.158, B:G.195 Salt bridges: B:K.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chu, C.-H. et al., Kinetics and Structural Properties of Triosephosphate Isomerase from Helicobacter Pylori. Proteins: Struct., Funct., Bioinf. (2008)

Release Date

2008-02-26

Peptides

TRIOSEPHOSPHATE ISOMERASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

TRIOSEPHOSPHATE ISOMERASE