SMTL ID : 2jj3.1

Estrogen receptor beta ligand binding domain in complex with a Benzopyran agonist

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

homo-dimer

Ligands

2 x JJ3: (3AS,4R,9BR)-4-(4-HYDROXYPHENYL)-6-(METHOXYMETHYL)-1,2,3,3A,4,9B-HEXAHYDROCYCLOPENTA[C]CHROMEN-8-OL(Non-covalent)

JJ3.1: 17 residues within 4Å: Chain A: M.47, L.50, T.51, A.54, E.57, M.88, L.91, M.92, R.98, F.108, I.125, I.128, F.129, G.224, H.227, L.228, V.239 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.91, A:F.108, A:I.125, A:I.128, A:F.129, A:L.228 Hydrogen bonds: A:E.57, A:R.98, A:H.227 pi-Stacking: A:F.108 JJ3.2: 17 residues within 4Å: Chain B: M.47, L.50, T.51, A.54, E.57, M.88, L.91, M.92, R.98, F.108, I.125, I.128, F.129, G.224, H.227, L.228, V.239 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:L.50, B:L.91, B:F.108, B:I.125, B:I.128, B:F.129, B:L.228 Hydrogen bonds: B:E.57, B:R.98 Water bridges: B:L.95 pi-Stacking: B:F.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Norman, B.H. et al., Benzopyrans as Selective Estrogen Receptor Beta Agonists (Serbas). Part 4: Functionalization of the Benzopyran A-Ring. Bioorg.Med.Chem.Lett. (2007)

Release Date

2007-08-07

Peptides

ESTROGEN RECEPTOR BETA: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ESTROGEN RECEPTOR BETA

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