SMTL ID : 2jk7.1

XIAP BIR3 bound to a Smac Mimetic

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.82 Å

Oligo State

monomer

Ligands

1 x BI6: (3S,6S,7Z,10AS)-N-(DIPHENYLMETHYL)-6-{[(2S)-2-(METHYLIDENEAMINO)BUTANOYL]AMINO}-5-OXO-1,2,3,5,6,9,10,10A-OCTAHYDROPYRROLO[1,2-A]AZOCINE-3-CARBOXAMIDE

BI6.1: 13 residues within 4Å: Chain A: L.52, K.57, V.58, G.66, L.67, T.68, D.69, W.70, K.71, E.74, Q.79, W.83, Y.84 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.52, A:K.57, A:T.68, A:W.70, A:W.83 Hydrogen bonds: A:G.66, A:T.68, A:T.68 pi-Cation interactions: A:K.57

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.60, C.63, H.80, C.87 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.60, A:C.63, A:H.80, A:C.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sun, H. et al., Structure-Based Design, Synthesis, Evaluation, and Crystallographic Studies of Conformationally Constrained Smac Mimetics as Inhibitors of the X-Linked Inhibitor of Apoptosis Protein (Xiap). J.Med.Chem. (2008)

Release Date

2008-11-04

Peptides

BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 4